Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0005Polysaccharide biosynthesis protein. (487 aa)    
Predicted Functional Partners:
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.903
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.894
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.891
OSCT_0909
Nucleotide sugar dehydrogenase.
  
  
 0.844
OSCT_0055
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.843
OSCT_2899
Glycosyl transferase family 2.
 
  
 0.778
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
  0.742
OSCT_0003
Hypothetical protein.
  
  
 0.715
OSCT_0004
Hypothetical protein.
       0.705
OSCT_0058
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.700
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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