STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0010Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family. (382 aa)    
Predicted Functional Partners:
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
 
 
 0.980
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.978
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.978
OSCT_0007
Oxidoreductase domain-containing protein.
 
 0.956
OSCT_0009
NAD-dependent epimerase/dehydratase.
 
 0.954
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.919
OSCT_0006
Hexapaptide repeat-containing transferase.
  0.897
OSCT_0008
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
    
0.776
OSCT_0015
Hexapaptide repeat-containing transferase.
  
 
 0.754
OSCT_1683
MoaA-related protein.
  
 
 0.745
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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