Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OSCT_0015Hexapaptide repeat-containing transferase. (204 aa)    
Predicted Functional Partners:
OSCT_0014
Hypothetical protein.
       0.780
OSCT_0016
Glycosyl transferase family 2.
  
  
 0.762
OSCT_0010
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.754
OSCT_0008
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.745
OSCT_0012
Polysaccharide deacetylase.
       0.727
OSCT_0013
Hypothetical protein.
       0.727
OSCT_0017
Serine acetyltransferase.
  
  
 0.722
OSCT_0011
Glycosyltransferase.
  
    0.677
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.659
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.659
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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