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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0027Glycosyl transferase group 1. (357 aa)    
Predicted Functional Partners:
OSCT_0028
Glycosyl transferase group 1.
 
    0.945
OSCT_0026
Glycosyl transferase family 2.
    
  0.807
OSCT_0033
Nucleotidyl transferase.
  
 0.679
OSCT_0013
Hypothetical protein.
  
     0.665
OSCT_0029
Response regulator receiver protein.
       0.628
OSCT_0014
Hypothetical protein.
  
     0.621
OSCT_2275
Hypothetical protein.
  
     0.619
OSCT_0232
HEAT repeat-containing PBS lyase.
  
     0.604
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.601
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.587
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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