STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0032Anti-sigma-factor antagonist. (112 aa)    
Predicted Functional Partners:
OSCT_0031
Protein serine phosphatase with GAF(s) sensor(s).
 
  0.967
OSCT_0593
Stage II sporulation E family protein.
 
 0.960
OSCT_0030
RsbW protein, putative.
 
  0.954
OSCT_0594
Cyclic nucleotide-binding protein.
 
 0.943
OSCT_2692
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.865
OSCT_0523
Stage II sporulation E family protein.
 
  0.837
OSCT_1338
Stage II sporulation E family protein.
  
  0.837
OSCT_2434
Protein serine/threonine phosphatase.
  
  0.835
OSCT_0341
Protein serine/threonine phosphatase.
  
  0.825
OSCT_2092
Stage II sporulation E family protein.
 
  0.823
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.