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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0061Hypothetical protein. (1348 aa)    
Predicted Functional Partners:
OSCT_0915
Hypothetical protein.
  
     0.728
OSCT_2116
Peptidase C14, caspase catalytic subunit p20.
 
     0.725
OSCT_1208
WD-40 repeat protein.
  
     0.701
OSCT_1860
WD-40 repeat-containing protein.
  
     0.686
OSCT_3185
WD40 repeat, subgroup.
  
     0.682
OSCT_0470
Putative WD-repeat containing protein.
  
     0.677
OSCT_1298
Serine/threonine protein kinase with WD40 repeats.
  
     0.663
OSCT_1950
TPR repeat-containing protein.
  
     0.663
OSCT_1374
WD-40 repeat-containing protein.
  
     0.660
OSCT_1506
G-protein beta WD-40 repeats containing protein, putative.
  
     0.660
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.