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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0117Hypothetical protein. (334 aa)    
Predicted Functional Partners:
OSCT_0118
Histidine triad (HIT) protein.
       0.732
OSCT_0119
Hypothetical protein.
       0.691
OSCT_0440
LmbE family protein.
 
     0.664
OSCT_2755
UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
 
     0.619
OSCT_0120
Hypothetical protein.
       0.614
OSCT_1275
Hypothetical protein.
 
    0.592
OSCT_3161
NAD-dependent epimerase/dehydratase.
 
     0.518
OSCT_1661
Protein of unknown function DUF58.
 
     0.515
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.480
OSCT_0121
Ribose-phosphate pyrophosphokinase.
  
    0.423
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.