STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0125Carbon monoxide dehydrogenase subunit G. (228 aa)    
Predicted Functional Partners:
OSCT_0123
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.964
OSCT_0122
Molybdopterin dehydrogenase FAD-binding.
 
 
 0.954
OSCT_0124
(2Fe-2S)-binding domain protein.
 
  
 0.878
OSCT_2362
VWA containing CoxE family protein.
 
     0.791
OSCT_0459
ATPase.
 
     0.719
OSCT_1418
Xanthine dehydrogenase.
 
 0.561
OSCT_0126
Phage integrase family protein; Belongs to the 'phage' integrase family.
       0.507
OSCT_0109
ATPase associated with various cellular activities AAA_5.
 
     0.503
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.447
OSCT_0128
Hypothetical protein.
       0.447
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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