STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0144Hypothetical protein. (318 aa)    
Predicted Functional Partners:
OSCT_0472
Cytochrome c class I.
   
 0.827
OSCT_2596
Cytochrome c oxidase, subunit II.
   
 0.827
OSCT_2597
Cytochrome c oxidase, subunit II.
    
 0.774
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.772
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.772
OSCT_1299
Oxidoreductase, molybdopterin binding.
   
 0.681
OSCT_2991
Hypothetical protein.
  
 
 0.582
OSCT_1476
Disulfide bond formation protein DsbB; Belongs to the DsbB family.
   
 0.528
OSCT_3015
Disulfide bond formation protein DsbB; Belongs to the DsbB family.
   
 0.528
OSCT_0980
Cytochrome C.
   
 0.513
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.