STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0213Thioredoxin reductase. (318 aa)    
Predicted Functional Partners:
OSCT_3085
Thioredoxin; Belongs to the thioredoxin family.
 
 0.989
OSCT_1583
Thioredoxin domain-containing protein.
  
 0.896
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.873
OSCT_3080
Ferredoxin.
   
 0.866
OSCT_1487
SufS subfamily cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.833
OSCT_1463
Cystathionine gamma-lyase.
   
 
 0.830
OSCT_2919
Selenide, water dikinase.
     
 0.811
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.804
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.804
OSCT_0974
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 0.776
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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