Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0231Extracellular solute-binding protein family 1. (424 aa)    
Predicted Functional Partners:
OSCT_1381
Binding-protein-dependent transport systems inner membrane component.
 
 0.983
OSCT_1536
ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
 0.977
OSCT_1380
Binding-protein-dependent transport systems inner membrane component.
 
 0.961
OSCT_1941
Extracellular solute-binding protein family 1.
  
  
  0.876
OSCT_1379
Extracellular solute-binding protein family 1.
  
  
  0.867
OSCT_2685
AAA-4 family protein.
  
     0.671
OSCT_0232
HEAT repeat-containing PBS lyase.
 
     0.593
OSCT_1437
TPR repeat-containing protein.
  
     0.586
OSCT_0839
Alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.569
OSCT_2194
Hypothetical protein.
  
  
 0.552
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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