rnpA protein (Oscillochloris trichoides) - STRING interaction network

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rnpA

Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (150 aa)

Predicted Functional Partners:

OSCT_0243

0.977

OSCT_0561

0.940

rplD

0.895

rpsJ

0.889

rplC

0.884

rpsT

0.881

rpmB

0.874

rex

0.869

rho

0.864

OSCT_0242

0.863

Your Current Organism:

Oscillochloris trichoides

NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OSCT_0242	OSCT_0243	OSCT_0242	OSCT_0243	Single-stranded nucleic acid binding R3H domain protein.	Hypothetical protein.	0.947
OSCT_0242	OSCT_0561	OSCT_0242	OSCT_0561	Single-stranded nucleic acid binding R3H domain protein.	Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.719
OSCT_0242	rho	OSCT_0242	OSCT_0228	Single-stranded nucleic acid binding R3H domain protein.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.696
OSCT_0242	rnpA	OSCT_0242	OSCT_0244	Single-stranded nucleic acid binding R3H domain protein.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.863
OSCT_0243	OSCT_0242	OSCT_0243	OSCT_0242	Hypothetical protein.	Single-stranded nucleic acid binding R3H domain protein.	0.947
OSCT_0243	OSCT_0561	OSCT_0243	OSCT_0561	Hypothetical protein.	Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.887
OSCT_0243	rho	OSCT_0243	OSCT_0228	Hypothetical protein.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.884
OSCT_0243	rnpA	OSCT_0243	OSCT_0244	Hypothetical protein.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.977
OSCT_0243	rplC	OSCT_0243	OSCT_0199	Hypothetical protein.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.859
OSCT_0243	rplD	OSCT_0243	OSCT_0198	Hypothetical protein.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.892
OSCT_0243	rpmB	OSCT_0243	OSCT_2752	Hypothetical protein.	Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.638
OSCT_0243	rpsJ	OSCT_0243	OSCT_0200	Hypothetical protein.	Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.846
OSCT_0243	rpsT	OSCT_0243	OSCT_0528	Hypothetical protein.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.598
OSCT_0561	OSCT_0242	OSCT_0561	OSCT_0242	Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Single-stranded nucleic acid binding R3H domain protein.	0.719
OSCT_0561	OSCT_0243	OSCT_0561	OSCT_0243	Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Hypothetical protein.	0.887
OSCT_0561	rho	OSCT_0561	OSCT_0228	Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.806
OSCT_0561	rnpA	OSCT_0561	OSCT_0244	Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.940
OSCT_0561	rplD	OSCT_0561	OSCT_0198	Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.638
rex	rnpA	OSCT_1959	OSCT_0244	CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.869
rho	OSCT_0242	OSCT_0228	OSCT_0242	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	Single-stranded nucleic acid binding R3H domain protein.	0.696

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