Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0269NAD-dependent epimerase/dehydratase. (320 aa)    
Predicted Functional Partners:
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.914
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.914
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.914
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 
0.855
OSCT_0946
NAD-dependent epimerase/dehydratase.
     
  0.817
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.771
OSCT_1061
NAD-dependent epimerase/dehydratase.
 
 0.756
OSCT_0033
Nucleotidyl transferase.
  
 
 0.699
OSCT_0947
Nucleotidyl transferase.
  
 
 0.699
OSCT_1631
Nucleotidyl transferase.
  
 
 0.699
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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