Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0348NMT1/THI5-like domain-containing protein. (373 aa)    
Predicted Functional Partners:
OSCT_0349
Binding-protein-dependent transport systems inner membrane component.
 
 0.982
OSCT_2865
Binding-protein-dependent transport systems inner membrane component.
 
 0.945
OSCT_2147
Binding-protein-dependent transport systems inner membrane component.
 
 0.868
OSCT_2152
Binding-protein-dependent transport systems inner membrane component.
 
 0.840
OSCT_0723
ABC transporter related protein.
 
 0.834
OSCT_2148
Probable ATP-binding component of ABC transporters.
 
 0.799
OSCT_2151
ABC transporter related protein.
 
 0.791
OSCT_2150
ABC transporter-related protein.
 
 0.790
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 
 0.585
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 
 0.585
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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