Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0367Hypothetical protein. (635 aa)    
Predicted Functional Partners:
trmB
Putative methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.709
trpF
Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
       0.701
OSCT_0365
Metallophosphoesterase.
 
     0.694
OSCT_2442
Hypothetical protein.
  
     0.630
OSCT_2685
AAA-4 family protein.
 
     0.594
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
 
     0.586
OSCT_1641
Alpha/beta hydrolase fold-containing protein.
  
     0.575
OSCT_0652
Hypothetical protein.
  
     0.511
OSCT_2680
Hypothetical protein.
  
     0.504
OSCT_2340
Glycosyl transferase group 1.
  
 
   0.502
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.