STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0368Glycosyl transferase family protein. (315 aa)    
Predicted Functional Partners:
OSCT_1385
Glycosyl transferase family 2.
 
  
 
0.812
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
 
 
 0.754
OSCT_1643
Glycosyl transferase family 4.
  
 
  0.732
OSCT_2645
Glycosyl transferase family 2.
  
  
 
0.677
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.651
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.651
OSCT_2350
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.630
OSCT_0369
Radical SAM domain-containing protein.
       0.549
OSCT_0716
Glycosyl transferase, group 2 family protein.
  
     0.549
OSCT_1345
Glycosyl transferase family protein.
  
    0.539
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.