STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0381Peptidase M50. (224 aa)    
Predicted Functional Partners:
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.761
OSCT_0652
Hypothetical protein.
  
     0.673
OSCT_2442
Hypothetical protein.
 
    0.670
OSCT_0379
Protein of unknown function DUF21.
 
     0.616
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
 
     0.588
OSCT_1437
TPR repeat-containing protein.
 
     0.578
OSCT_1641
Alpha/beta hydrolase fold-containing protein.
 
     0.578
OSCT_2851
N-acetylmuramoyl-L-alanine amidase.
  
     0.548
OSCT_0604
Hypothetical protein.
  
  
 0.533
OSCT_2680
Hypothetical protein.
  
     0.524
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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