STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0388Phospholipid/glycerol acyltransferase. (308 aa)    
Predicted Functional Partners:
OSCT_0507
Beta-ketoacyl synthase.
 
 0.752
OSCT_1453
Hypothetical protein.
  
   0.614
OSCT_0389
Two-component sensor histidine kinase.
       0.513
OSCT_1126
Alpha/beta hydrolase fold-containing protein.
  
   0.497
OSCT_1227
PAS sensor protein.
  
 
 0.473
OSCT_2314
Glycerol-3-phosphate dehydrogenase, anaerobic, A subunit.
 
 
 0.460
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.457
OSCT_0390
Two component LuxR family transcriptional regulator.
       0.451
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.445
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.443
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.