STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0392Immunoglobulin I-set domain protein. (410 aa)    
Predicted Functional Partners:
OSCT_2022
SNF2-related helicase.
  
 0.974
OSCT_1139
WD-40 repeat-containing protein.
 
  0.937
OSCT_1214
Helicase domain-containing protein.
  
 0.927
OSCT_1193
Hypothetical protein.
  
 0.910
OSCT_2074
UBA/THIF-type NAD/FAD binding protein.
 
 0.910
OSCT_2511
Hypothetical protein.
  
 0.910
OSCT_2922
Proton-translocating NADH-quinone oxidoreductase, chain M.
   
 
 0.910
OSCT_2923
Proton-translocating NADH-quinone oxidoreductase, chain M.
   
 
 0.910
OSCT_2931
NADH-quinone oxidoreductase, B subunit.
   
   0.908
nuoH
NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.904
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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