STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0399NADH dehydrogenase (quinone). (505 aa)    
Predicted Functional Partners:
OSCT_0402
NADH dehydrogenase (quinone).
 
0.999
OSCT_0398
Cation antiporter.
 
 
 0.998
OSCT_0400
NADH-ubiquinone oxidoreductase chain 4L.
 
 
 0.998
OSCT_0401
Na+/H+ antiporter MnhB subunit-related protein.
 
 0.998
OSCT_0397
Monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.993
OSCT_2924
Proton-translocating NADH-quinone oxidoreductase, chain L.
 
0.950
OSCT_1988
Hypothetical protein.
    
 0.899
OSCT_2739
NADH-ubiquinone oxidoreductase chain 49kDa.
 
 
 0.864
OSCT_1909
NADH dehydrogenase (quinone).
    
 0.860
OSCT_2736
NADH/ubiquinone/plastoquinone (complex I).
 
  
  0.771
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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