STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0400NADH-ubiquinone oxidoreductase chain 4L. (114 aa)    
Predicted Functional Partners:
OSCT_0398
Cation antiporter.
 
 
 0.999
OSCT_0402
NADH dehydrogenase (quinone).
 
 0.999
OSCT_0399
NADH dehydrogenase (quinone).
 
 
 0.998
OSCT_0401
Na+/H+ antiporter MnhB subunit-related protein.
 
 
 0.997
OSCT_0397
Monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.993
OSCT_2738
Hypothetical protein.
 
 
 0.973
OSCT_2924
Proton-translocating NADH-quinone oxidoreductase, chain L.
  
 0.928
OSCT_0403
CaCA family Na(+)/Ca(+) antiporter.
     
 0.633
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
  0.597
OSCT_2931
NADH-quinone oxidoreductase, B subunit.
   
  0.597
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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