STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0402NADH dehydrogenase (quinone). (779 aa)    
Predicted Functional Partners:
OSCT_0397
Monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.999
OSCT_0398
Cation antiporter.
 
 
 0.999
OSCT_0399
NADH dehydrogenase (quinone).
 
0.999
OSCT_0400
NADH-ubiquinone oxidoreductase chain 4L.
 
 0.999
OSCT_0401
Na+/H+ antiporter MnhB subunit-related protein.
 
 0.999
OSCT_1324
Hypothetical protein.
  
 0.999
OSCT_1909
NADH dehydrogenase (quinone).
  
 0.999
OSCT_2738
Hypothetical protein.
 
 0.999
OSCT_2928
Hypothetical protein.
  
 0.999
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
 
 0.999
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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