STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0409Hypothetical protein. (396 aa)    
Predicted Functional Partners:
OSCT_0410
Amidohydrolase.
       0.548
OSCT_0411
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
     0.523
OSCT_1747
Hypothetical protein.
 
 
 0.481
OSCT_0412
Fructosamine kinase.
  
    0.476
OSCT_2690
Arginase; Belongs to the arginase family.
   
 
 0.463
OSCT_2074
UBA/THIF-type NAD/FAD binding protein.
   
   0.424
OSCT_0241
Ribokinase-like domain-containing protein.
  
  
  0.419
OSCT_0407
Two component transcriptional regulator, winged helix family.
       0.417
OSCT_0408
PAS/PAC sensor signal transduction histidine kinase.
       0.417
OSCT_2581
Hypothetical protein.
  
     0.404
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.