STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0422Hypothetical protein. (639 aa)    
Predicted Functional Partners:
OSCT_0421
ABC transporter related protein.
 
    0.946
OSCT_1424
AMP-dependent synthetase and ligase.
 
 0.927
OSCT_0507
Beta-ketoacyl synthase.
  
 0.912
OSCT_1810
Von Willebrand factor type A.
 
 
  0.845
OSCT_1909
NADH dehydrogenase (quinone).
    
   0.839
OSCT_1968
Hypothetical protein.
 
 
  0.804
OSCT_0735
ABC-2 type transporter.
 
     0.803
OSCT_1811
Hypothetical protein.
 
 
  0.803
OSCT_0423
Hypothetical protein.
       0.797
OSCT_1340
Von Willebrand factor type A.
 
     0.790
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.