STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0445Hypothetical protein. (536 aa)    
Predicted Functional Partners:
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
    
  0.905
OSCT_1320
MazG nucleotide pyrophosphohydrolase.
  
  
  0.633
OSCT_2278
LPXTG-motif cell wall anchor domain protein; Belongs to the 5'-nucleotidase family.
    
 0.582
OSCT_0446
Hypothetical protein.
       0.563
OSCT_2541
Hypothetical protein.
  
     0.552
OSCT_1178
Hypothetical protein.
  
  
 0.529
OSCT_0597
NHL repeat-containing protein.
  
  
 0.525
OSCT_0444
ROK family protein.
       0.516
OSCT_1113
Hypothetical protein.
  
     0.502
OSCT_3034
SpoVR family protein.
   
    0.491
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.