STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0468Hypothetical protein. (145 aa)    
Predicted Functional Partners:
OSCT_1858
Hypothetical protein.
   
 
 0.961
OSCT_0469
Hypothetical protein.
       0.722
OSCT_0048
Cobyrinic acid ac-diamide synthase.
    
 
 0.592
OSCT_1023
Cobyrinic acid ac-diamide synthase.
    
 
 0.592
OSCT_1584
Cobyrinic acid ac-diamide synthase.
    
 
 0.592
OSCT_1680
Cobyrinic acid ac-diamide synthase.
    
 
 0.592
OSCT_2365
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.539
OSCT_0551
Glutamate synthase (ferredoxin).
      
 0.463
OSCT_1371
Hypothetical protein.
    
 0.453
OSCT_0467
Peptidase S41.
       0.452
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.