Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0477NAD-dependent epimerase/dehydratase. (320 aa)    
Predicted Functional Partners:
OSCT_0909
Nucleotide sugar dehydrogenase.
 0.952
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.867
OSCT_1318
Glycosyl transferase, group 1.
  
 
  0.839
OSCT_0476
O-antigen polymerase.
       0.817
OSCT_0551
Glutamate synthase (ferredoxin).
    
  0.803
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
  0.790
OSCT_1621
Glycosyl transferase group 1.
   
 
  0.773
OSCT_3059
Glycosyl transferase group 1.
  
 
  0.688
OSCT_1762
Glycosyl transferase group 1.
  
 
  0.683
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.648
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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