close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0486O-antigen polymerase. (483 aa)    
Predicted Functional Partners:
OSCT_0487
O-antigen polymerase.
     0.991
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.861
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.861
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.861
OSCT_0429
Polysaccharide biosynthesis protein.
 
  
 0.832
OSCT_1533
O-antigen polymerase.
  
     0.763
OSCT_0970
Hypothetical protein.
     0.664
OSCT_0897
DNA binding domain protein, excisionase family.
  
     0.663
OSCT_0005
Polysaccharide biosynthesis protein.
 
  
 0.659
OSCT_0971
Hypothetical protein.
 
     0.650
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.