STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0503Biotin/lipoyl attachment domain-containing protein. (164 aa)    
Predicted Functional Partners:
OSCT_0505
propionyl-CoA carboxylase.
 
 0.966
OSCT_0507
Beta-ketoacyl synthase.
 
 
 0.955
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
   
 0.952
OSCT_2164
Carboxyl transferase.
 
 0.925
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.907
OSCT_1424
AMP-dependent synthetase and ligase.
  
 0.893
OSCT_0993
Propionyl-CoA carboxylase.
 
 0.862
OSCT_2648
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.852
OSCT_1900
Hypothetical protein.
  
 0.781
OSCT_0504
Biotin carboxylation domain-containing protein.
       0.760
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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