STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0508acyl-CoA dehydrogenase domain-containing protein. (544 aa)    
Predicted Functional Partners:
OSCT_1900
Hypothetical protein.
  
 0.983
OSCT_1424
AMP-dependent synthetase and ligase.
  
 0.971
OSCT_0507
Beta-ketoacyl synthase.
 
 0.967
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.907
OSCT_2622
Electron transfer flavoprotein alpha subunit.
 
 0.861
OSCT_2366
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.817
OSCT_2621
Electron transfer flavoprotein alpha/beta-subunit.
 
 
 0.805
OSCT_1520
Electron transfer flavoprotein alpha subunit.
 
 
 0.800
OSCT_1901
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.790
OSCT_3064
Enoyl-CoA hydratase/isomerase.
  
 0.780
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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