Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0540Hypothetical protein. (714 aa)    
Predicted Functional Partners:
OSCT_1153
Methyltransferase type 11.
  
     0.744
OSCT_0914
Hypothetical protein.
  
     0.742
OSCT_0854
Glycosyl transferase family protein.
  
     0.733
OSCT_0236
Hypothetical protein.
  
     0.719
hppA-2
Membrane-bound proton-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.
       0.718
OSCT_0851
Hypothetical protein.
 
    0.710
OSCT_1758
Membrane protein-like protein.
  
     0.708
OSCT_1275
Hypothetical protein.
 
     0.698
OSCT_0237
Hypothetical protein.
  
     0.663
OSCT_2390
Hypothetical protein.
  
     0.619
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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