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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0560Hypothetical protein. (211 aa)    
Predicted Functional Partners:
OSCT_0561
Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.781
OSCT_2206
GAF sensor signal transduction histidine kinase.
  
 
  0.633
OSCT_2630
Multi-sensor signal transduction histidine kinase.
  
 
  0.630
OSCT_0559
Molybdenum cofactor synthesis domain protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.577
OSCT_1416
Two-component hybrid sensor and regulator.
  
 
  0.500
OSCT_2834
Two-component hybrid sensor and regulator.
  
 
  0.500
OSCT_0562
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.481
OSCT_0563
Putative transmembrane anti-sigma factor.
       0.481
OSCT_2633
Multi-sensor hybrid histidine kinase.
    
  0.480
OSCT_1227
PAS sensor protein.
    
  0.477
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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