Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
OSCT_0568GHMP kinase. (350 aa)    
Predicted Functional Partners:
OSCT_1855
Phosphoheptose isomerase.
 
 0.986
OSCT_0947
Nucleotidyl transferase.
   
 0.795
OSCT_0569
Glycosyl transferase group 1.
       0.773
OSCT_0570
Cobalamin B12-binding domain-containing protein.
       0.773
OSCT_0571
NAD/NADP octopine/nopaline dehydrogenase.
       0.714
OSCT_0033
Nucleotidyl transferase.
    
 0.701
OSCT_1631
Nucleotidyl transferase.
    
 0.701
OSCT_0567
Hypothetical protein.
       0.598
OSCT_0566
Aminotransferase class I and II.
 
     0.583
OSCT_2632
N-acetylglucosamine-1-phosphate uridyltransferase-like protein.
  
  
  0.459
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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