Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0570Cobalamin B12-binding domain-containing protein. (543 aa)    
Predicted Functional Partners:
OSCT_0571
NAD/NADP octopine/nopaline dehydrogenase.
 
     0.943
OSCT_1738
LAO/AO transport system ATPase.
  
 0.930
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.914
OSCT_0520
methylmalonyl-CoA mutase, large subunit.
  
 0.895
OSCT_1630
methylmalonyl-CoA mutase, large subunit.
  
 0.895
OSCT_0507
Beta-ketoacyl synthase.
  
 
 0.859
OSCT_0551
Glutamate synthase (ferredoxin).
     
  0.845
OSCT_2969
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.845
OSCT_0568
GHMP kinase.
       0.773
OSCT_0569
Glycosyl transferase group 1.
       0.773
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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