STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0574Thioesterase superfamily. (160 aa)    
Predicted Functional Partners:
OSCT_0507
Beta-ketoacyl synthase.
  
 
 0.962
OSCT_1900
Hypothetical protein.
 
 
 0.870
OSCT_1424
AMP-dependent synthetase and ligase.
  
 
 0.788
OSCT_0572
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.675
OSCT_0573
Hypothetical protein.
       0.675
OSCT_0164
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.623
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.616
OSCT_0575
Protein-tyrosine phosphatase.
       0.603
OSCT_0576
Alpha/beta hydrolase fold protein.
       0.603
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
    
 0.440
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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