Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OSCT_0575Protein-tyrosine phosphatase. (174 aa)    
Predicted Functional Partners:
OSCT_0576
Alpha/beta hydrolase fold protein.
   
  0.803
OSCT_2791
Hypothetical protein.
    
 
 0.761
OSCT_2511
Hypothetical protein.
  
 
 0.744
OSCT_2395
Hypothetical protein.
   
 0.685
OSCT_1193
Hypothetical protein.
    
 0.643
OSCT_0574
Thioesterase superfamily.
       0.603
OSCT_0572
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.531
OSCT_0573
Hypothetical protein.
       0.531
OSCT_0571
NAD/NADP octopine/nopaline dehydrogenase.
    
  0.522
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
   0.487
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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