STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0605ABC transporter related protein. (305 aa)    
Predicted Functional Partners:
OSCT_0044
ABC-2 type transporter.
 
 0.963
OSCT_0604
Hypothetical protein.
 
     0.860
OSCT_1919
ABC transporter related protein.
 
 
0.827
OSCT_3112
ABC transporter related protein.
 
 
0.827
OSCT_0603
Alpha/beta hydrolase fold protein.
       0.773
OSCT_0754
ABC transporter related protein.
 
 
0.739
OSCT_0805
Hypothetical protein.
 
      0.738
OSCT_0755
ABC transporter related protein.
 
 
0.721
OSCT_2274
Hypothetical protein.
 
      0.717
OSCT_1069
ABC-2 type transporter.
 
 
 0.703
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.