STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0624Cyclic nucleotide-binding protein. (710 aa)    
Predicted Functional Partners:
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.926
OSCT_2849
Response regulator receiver.
 
 0.858
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.855
OSCT_2459
ATPase-like protein.
 
 0.834
OSCT_2987
AAA ATPase.
 
 0.833
OSCT_0507
Beta-ketoacyl synthase.
   
 0.814
OSCT_1112
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
 0.794
OSCT_2698
Na-Ca exchanger/integrin-beta4.
  
  
 0.779
OSCT_2630
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.766
OSCT_0460
GAF domain-containing protein.
 
     0.760
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.