Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0696Putative branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (374 aa)    
Predicted Functional Partners:
OSCT_0697
Putative periplasmic binding protein and sugar binding domain of the LacI family protein.
 0.999
OSCT_0695
Putative ABC transporter.
 0.998
OSCT_1224
Monosaccharide-transporting ATPase.
 0.998
OSCT_2686
ABC transporter related protein.
 
     0.881
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.794
OSCT_2197
ABC transporter related protein.
 
     0.778
OSCT_2804
PfkB domain protein.
 
  
 0.762
OSCT_0698
Inositol 2-dehydrogenase.
 
    0.729
OSCT_2317
Dihydroxyacetone kinase, phosphotransfer subunit.
  
  
 0.673
OSCT_2588
Carbohydrate kinase FGGY.
 
  
 0.543
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.