STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0697Putative periplasmic binding protein and sugar binding domain of the LacI family protein. (356 aa)    
Predicted Functional Partners:
OSCT_0696
Putative branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.999
OSCT_1227
PAS sensor protein.
  
 0.997
OSCT_0648
GAF sensor hybrid histidine kinase.
   
 0.991
OSCT_1234
PAS sensor protein.
  
 0.991
OSCT_1932
PAS fold family protein.
   
 0.991
OSCT_0695
Putative ABC transporter.
 0.986
OSCT_1228
Multi-sensor signal transduction histidine kinase.
  
 0.985
OSCT_0658
Multi-sensor hybrid histidine kinase.
  
 0.984
OSCT_0958
PAS domain S-box protein.
   
 0.984
OSCT_1935
Multi-sensor hybrid histidine kinase.
  
 0.984
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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