STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0703ABC-type branched-chain amino acid transport systems periplasmic component-like protein. (411 aa)    
Predicted Functional Partners:
OSCT_0702
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
OSCT_0704
ABC transporter related protein.
 
 
 0.992
OSCT_0701
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.990
OSCT_0699
ABC transporter related protein.
 
 
 0.984
OSCT_0617
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.979
OSCT_0616
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.963
OSCT_0618
ABC transporter related protein.
 
 
 0.954
OSCT_0619
ABC transporter related protein.
 
 
 0.933
OSCT_0705
Coenzyme F390 synthetase-like protein.
 
    0.878
OSCT_0700
AMP-dependent synthetase and ligase.
 
    0.859
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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