STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0705Coenzyme F390 synthetase-like protein. (406 aa)    
Predicted Functional Partners:
OSCT_0703
ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
 
    0.878
OSCT_0704
ABC transporter related protein.
 
  0.877
OSCT_0700
AMP-dependent synthetase and ligase.
 
    0.857
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
 0.818
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
 0.818
OSCT_0699
ABC transporter related protein.
 
    0.768
OSCT_0900
Succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.699
OSCT_0935
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.699
OSCT_1397
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.699
OSCT_1890
Aldehyde dehydrogenase.
  
 0.699
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.