Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_0710Beta-lactamase domain protein. (305 aa)    
Predicted Functional Partners:
OSCT_2074
UBA/THIF-type NAD/FAD binding protein.
  
 0.795
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
  
    0.713
OSCT_1666
Hypothetical protein.
    
 0.602
OSCT_0507
Beta-ketoacyl synthase.
   
 0.494
OSCT_2904
Sulphate transporter.
  
 0.469
OSCT_2394
Transcriptional regulator, LuxR family.
    
 
 0.463
OSCT_0712
GCN5-related N-acetyltransferase.
       0.462
OSCT_2169
AD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.460
OSCT_1900
Hypothetical protein.
  
 
 0.454
OSCT_1903
Rhodanese domain protein.
  
 0.447
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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