STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0717ABC transporter related protein. (412 aa)    
Predicted Functional Partners:
OSCT_0718
ABC-2 type transporter.
 
 0.999
OSCT_0849
ABC-2 type transporter.
 0.996
OSCT_0720
Glycosyl transferase, group 2 family protein.
 
  
 0.891
OSCT_0719
Hypothetical protein.
  
  
 0.830
OSCT_0713
Glycosyl transferase family protein.
 
 
 0.821
OSCT_0714
Glycosyl transferase, group 2 family protein.
 
  
 0.791
OSCT_0716
Glycosyl transferase, group 2 family protein.
 
  
 0.779
OSCT_2899
Glycosyl transferase family 2.
  
 0.720
OSCT_0715
Glycosyl transferase family 2.
  
  
 0.677
OSCT_0519
Amidophosphoribosyltransferase-like protein.
   
    0.572
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.