STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0725Cytochrome c nitrate reductase, small subunit. (155 aa)    
Predicted Functional Partners:
OSCT_0724
Respiratory nitrite reductase (cytochrome; ammonia-forming) precursor; Belongs to the cytochrome c-552 family.
 
 0.996
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 0.964
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 0.964
OSCT_2597
Cytochrome c oxidase, subunit II.
  
 
 0.827
OSCT_0472
Cytochrome c class I.
   
 
 0.819
OSCT_2596
Cytochrome c oxidase, subunit II.
   
 
 0.819
OSCT_0145
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.761
OSCT_2625
Glutamine synthetase, type I.
     
 0.725
OSCT_1227
PAS sensor protein.
   
 0.708
OSCT_0744
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.693
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.