Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0729Hypothetical protein. (343 aa)    
Predicted Functional Partners:
OSCT_0730
FAD dependent oxidoreductase.
       0.737
OSCT_0731
Hypothetical protein.
       0.737
OSCT_1148
Hypothetical protein; Belongs to the carbohydrate kinase PfkB family.
   
    0.590
OSCT_1900
Hypothetical protein.
    
 0.563
OSCT_0937
Phospholipase/carboxylesterase.
     
 0.555
OSCT_0507
Beta-ketoacyl synthase.
    
 0.528
OSCT_0732
Hypothetical protein.
       0.501
OSCT_2395
Hypothetical protein.
    
 0.442
OSCT_0733
Putative aminotransferase.
       0.441
OSCT_0728
Histidine kinase dimerization and phosphoacceptor region.
  
    0.440
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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