OSCT_0734 protein (Oscillochloris trichoides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OSCT_0734

Hypothetical protein. (671 aa)

Predicted Functional Partners:

OSCT_0551

0.872

OSCT_2365

0.794

OSCT_2698

0.793

OSCT_3108

0.771

OSCT_0232

0.769

guaA

0.769

OSCT_0460

0.768

OSCT_2275

0.767

OSCT_2347

0.767

OSCT_0693

0.764

Your Current Organism:

Oscillochloris trichoides

NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OSCT_0232	OSCT_0460	OSCT_0232	OSCT_0460	HEAT repeat-containing PBS lyase.	GAF domain-containing protein.	0.774
OSCT_0232	OSCT_0693	OSCT_0232	OSCT_0693	HEAT repeat-containing PBS lyase.	Hypothetical protein.	0.772
OSCT_0232	OSCT_0734	OSCT_0232	OSCT_0734	HEAT repeat-containing PBS lyase.	Hypothetical protein.	0.769
OSCT_0232	OSCT_2275	OSCT_0232	OSCT_2275	HEAT repeat-containing PBS lyase.	Hypothetical protein.	0.775
OSCT_0232	OSCT_2347	OSCT_0232	OSCT_2347	HEAT repeat-containing PBS lyase.	Conserved repeat domain protein.	0.774
OSCT_0232	OSCT_2698	OSCT_0232	OSCT_2698	HEAT repeat-containing PBS lyase.	Na-Ca exchanger/integrin-beta4.	0.770
OSCT_0232	OSCT_3108	OSCT_0232	OSCT_3108	HEAT repeat-containing PBS lyase.	Hypothetical protein.	0.774
OSCT_0460	OSCT_0232	OSCT_0460	OSCT_0232	GAF domain-containing protein.	HEAT repeat-containing PBS lyase.	0.774
OSCT_0460	OSCT_0693	OSCT_0460	OSCT_0693	GAF domain-containing protein.	Hypothetical protein.	0.764
OSCT_0460	OSCT_0734	OSCT_0460	OSCT_0734	GAF domain-containing protein.	Hypothetical protein.	0.768
OSCT_0460	OSCT_2275	OSCT_0460	OSCT_2275	GAF domain-containing protein.	Hypothetical protein.	0.774
OSCT_0460	OSCT_2347	OSCT_0460	OSCT_2347	GAF domain-containing protein.	Conserved repeat domain protein.	0.770
OSCT_0460	OSCT_2365	OSCT_0460	OSCT_2365	GAF domain-containing protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.448
OSCT_0460	OSCT_2698	OSCT_0460	OSCT_2698	GAF domain-containing protein.	Na-Ca exchanger/integrin-beta4.	0.777
OSCT_0460	OSCT_3108	OSCT_0460	OSCT_3108	GAF domain-containing protein.	Hypothetical protein.	0.773
OSCT_0460	guaA	OSCT_0460	OSCT_1004	GAF domain-containing protein.	Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.	0.801
OSCT_0551	OSCT_0734	OSCT_0551	OSCT_0734	Glutamate synthase (ferredoxin).	Hypothetical protein.	0.872
OSCT_0551	OSCT_2365	OSCT_0551	OSCT_2365	Glutamate synthase (ferredoxin).	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.470
OSCT_0551	OSCT_2698	OSCT_0551	OSCT_2698	Glutamate synthase (ferredoxin).	Na-Ca exchanger/integrin-beta4.	0.424
OSCT_0551	guaA	OSCT_0551	OSCT_1004	Glutamate synthase (ferredoxin).	Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.	0.962

page 1 of 4

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About