STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0746FHA domain-containing protein. (863 aa)    
Predicted Functional Partners:
OSCT_2293
Serine/threonine protein kinase with PASTA sensor(s).
   
 
 0.836
OSCT_3196
Protein kinase.
   
 
 0.836
OSCT_1227
PAS sensor protein.
  
 
 0.822
OSCT_1310
PAS fold family protein.
  
 
  0.813
OSCT_2630
Multi-sensor signal transduction histidine kinase.
  
 
  0.761
OSCT_0222
Multi-sensor signal transduction histidine kinase.
    
  0.720
OSCT_2703
Multi-sensor hybrid histidine kinase.
    
  0.720
OSCT_2206
GAF sensor signal transduction histidine kinase.
  
 
  0.692
OSCT_0648
GAF sensor hybrid histidine kinase.
  
 
 0.686
OSCT_1234
PAS sensor protein.
  
 
 0.686
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.