STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_0749SCP-like extracellular. (190 aa)    
Predicted Functional Partners:
OSCT_0748
Serine protease; Belongs to the peptidase S8 family.
 
 
 0.653
OSCT_1909
NADH dehydrogenase (quinone).
    
  0.637
OSCT_2104
Peptidase S8 and S53 subtilisin kexin sedolisin.
  
  
  0.579
OSCT_0617
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
   0.560
OSCT_0702
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
    
   0.560
OSCT_2203
Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
 
  
  0.446
OSCT_0024
Hypothetical protein.
    
 0.445
OSCT_2698
Na-Ca exchanger/integrin-beta4.
    
 0.445
OSCT_0919
Hypothetical protein.
   
    0.408
OSCT_2541
Hypothetical protein.
   
    0.408
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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