STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpALamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (251 aa)    
Predicted Functional Partners:
OSCT_0766
Allophanate hydrolase subunit 1.
 
 0.999
OSCT_0767
Urea amidolyase related protein.
 
 0.999
OSCT_1397
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.853
OSCT_1286
Glutamine synthetase catalytic region.
   
 
  0.765
OSCT_2625
Glutamine synthetase, type I.
   
 
  0.765
OSCT_0145
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.762
OSCT_0935
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.727
OSCT_0900
Succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.560
OSCT_1890
Aldehyde dehydrogenase.
   
 
  0.560
OSCT_1889
Citrate synthase I; Belongs to the citrate synthase family.
   
    0.526
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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